Most geckos are very sensative to vibrations and noises, how ever if you can take the water fall out and get them used to the same sort of sound, then they might get over it. Also, many day geckos will avoid direct water and will drink beads of water off plants and your tank walls. In this sense you really dont need the waterfall as long as you mist the tank. Could you tell us the size of the tank as well as provide some pictures? It would clarify your question much better.
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If you know everything you may as well blow your brains out because the reason for existence is to learn more everyday." - Mark O'Shea, 2004
1.0.0 Chicken turtle
0.0.1 Leopard gecko
0.0.1 Loggerhead Musk turtle
1.0.0 Black lab
0.0.? (occasional red ear slider)
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